Essel Program - 2004 Annual Report


ANNUAL REPORT OF THE ESSEL NEUROSCIENCE PROGRAM AT WILLIAMS COLLEGE, 12 th Year
July 2003 thru June 2004

The Neuroscience Program

The Neuroscience Program has continued to thrive in the past year. Sixty-eight students enrolled in Introduction to Neuroscience and there were sixteen seniors who graduated with a concentration in Neuroscience. Additionally fifteen students worked in neuroscience professor's laboratories over the summer and seven completed honors theses.

I. Undergraduate Research Fellows:

The research topics and accomplishments of the fifteen summer research students are listed in Appendix I. The titles and abstracts of the seven Neuroscience theses that were completed in 2004 can be found in Appendix II.

II. Williams Neuroscience Faculty:

The faculty was actively engaged in research and teaching this past year. Faculty publications that were supported in part by Essel funds are listed in Appendix III and a summary of all of their work in addition to publications can be found in Appendix IV. Appendix V enumerates all other current sources of funding for Neuroscience faculty and the corresponding project.

This year, we've welcomed a new Neuroscience Professor, Lara Hutson. She has a B.A. in Chemistry/Biochemistry from U.C. San Diego, and PhD in Neurobiology from the University of Washington where she studied the mechanisms of programmed cell death in the developing retina. After completion of her Ph.D., she took a post-doc in the department of Neurobiology and Anatomy at the University of Utah where she studied the cell biological and molecular genetic mechanisms by which the processes of retinal neurons navigate to their appropriate synaptic targets in the zebrafish.

The goal of Lara's research is to determine whether sHSPs are important for normal development, physiological buffering, or both as neuronal processes extend and begin to navigate to their appropriate targets. HSPs are a family of proteins known as the heat shock proteins which, in addition to regulating a variety of physiological processes, act to buffer cells from the effects of environmental insult and, intriguingly, from differences in genetic background. Because of its plasticity, the developing nervous system is uniquely vulnerable to the effects of genetic or environmental disturbance, and many neurological disorders stem from problems that arise due to one or both types of disturbances. There is an abundance of data pointing to a role for the “small” HSP (sHSP) subfamily of HSPs in development of neuronal wiring patterns. However, this possibility has remained untested until now. In a recent study, done in conjunction with a Williams student, she obtained data suggesting that, indeed, one of the sHSPs, HSP27 is critical for axon outgrowth in many classes of neurons. Her future plans are to determine whether HSP27 is required in the neurons themselves or in the surrounding tissue, whether slightly reducing HSP27 levels (as opposed to complete removal) has less profound effects on wiring of the nervous system, and whether other members of the sHSP family play similar roles.

III. Neuroscience Courses:

This year in the Introduction to Neuroscience course (NSCI 201) we maintained the expanded laboratory component from the previous year, continuing with five labs and a lab report, as opposed to the four labs of previous years.
The Neuroscience faculty continued to offer exciting and interesting empirically oriented upper level courses in Neuroscience, including two new courses offered by Professor Hutson; Cell Dynamics (BIOL 410) in the fall and Mechanisms of Nervous System Development (BIOL 310) in the spring. A complete listing and description of courses, including the syllabi of the two new courses, is located in Appendix VIII.

IV. Essel Fellow:

Dr. Luis Schettino continued to do an excellent job as the instructor of the Introduction to Neuroscience class labs during his second year as the Senior Essel Fellow, and accomplished a number of other things as well. This winter study period, he taught a very popular winter study course entitled The Neuropsychological Basis of Creativity. He also took on a student researcher for the summer and continued pursuing his research interests on the neural basis of sensorimotor controls using the EEG/ERP (electroencephalo-graphy/event-related potentials) equipment he set up. Throughout the year he conducted a human evoked potential experiment designed to explore the timing of cortical activation during the perception of graspable objects as compared to non-graspable ones. Two of his research efforts were published this year, one in Experimental Brain Research and the other in Neuropsychologia (see APPENDIX III). He is also preparing an article for publication on the motor deficits of Parkinson's disease patients during grasping.

Dr. Schettino has decided to accept a tenure-track position in the Psychology Department of Trinity University in San Antonio, Texas, and thus will be concluding his time at Williams in June 2004. A new Senior Essel Fellow, Laurel Pritchard has been hired to fill his position in the coming year. She is coming from the University of Cincinnati, College of Medicine Neuroscience PhD program. She hopes to continue work on the role of D3 receptors in psychotic disorders.

Laurel Bifano, '02, continued assisting Dr. Schettino with the Introduction to Neuroscience laboratories as the Junior Essel Fellow. During this time, she also worked with Dr. Zottoli's Neurobiology lab and took the second semester of organic chemistry, continuing her efforts to fulfill premedical requirements. In addition to her lab prep responsibilities, Laurel has been working with Professor Zimmerberg on her ongoing study on the neuromodulatory effects of maternal separation on anxiety and neurosteroids in the brain. During second semester, Laurel audited Betty Zimmerberg's Drugs and Behavior class and assisted with the empirical projects associated with that class. She also took second semester Physics and studied for and took the MCAT.

Laurel is currently looking for a new research position in the New York or Boston area and is beginning the medical school application process. Mary Flynn, a Biology major from the Williams class of 2004, will be assuming the position of the Junior Essel Research fellow in the fall of 2004.

V. Colloquium Speakers:

The Neuroscience program had continued success in bringing interesting and qualified speakers to campus this year. A listing of these speakers and their topics and affiliations can be found in Appendix VI.

VI. Williams College Program for Undergraduates at the Marine Biological Laboratory at Woods Hole:

Dr. Steve Zottoli continued to direct the Williams College Program for undergraduate studies at the MBL. Additional funding for the program was provided by Howard Hughes Medical Institute and Nan and Howard Schow. A summary of the student's activities can be found in Appendix IX.

VII. Budget:

Appendix VII presents the expenditures for year 11. An explanation of expenditures is also provided in that appendix.

cc: W. Lenhart, Dean of the Faculty
C. Hill, Provost
D. Dewey, Development Office
Neuroscience Faculty (Hutson, Sandstrom, Solomon, Williams, Zimmerberg,
Zottoli)


APPENDIX I: 2003 ESSEL NEUROSCIENCE FELLOWS

Student: Nicolas Bamat ('04)
Advisor: Noah Sandstrom
Project: Studied whether the elimination of endogenous testosterone via gonadectomy had any effect on spatial memory using the Morris Water Maze and began preparation for his thesis.
Currently: Working as a research technician in the Neuroscience department at Albert
Einstein Medical College and applying to medical school.

Student: Miles Belknap ('05)
Advisor: Luis Schettino
Project: Designed experiments to explore the motor processing and control and conscious experience of willed action and the relationship between them.
Currently: Senior at Williams. Philosophy major.

Student: Gregory Del Prete ('04)
Advisor: Heather Williams
Project: Began thesis work on re-configuration of song representation in the adult zebra finch.
Currently: Attending the University of Pennsylvania to pursue a Ph.D. in Microbiology and Virology.

Student: Rosemary Eseh ('04)
Advisor: Steve Zottoli
Project: Examined how blocking telencephalon activity does not alter electrophysiological recording but could serve to eliminate pain that the fish experiences during recordings.
Currently: Working as a counselor for the National Institute for People with Disabilities.

Student: Alyssa Fluty ('05)
Advisor: Betty Zimmerberg
Project: Investigated behavior and allopregnanolone concentrations in rats bred to show high- and low-rates of vocalizations.
Currently: Senior at Williams. Psychology major, Neuroscience concentrator.

Student: Tory Hendry ('04)
Advisor: Heather Williams
Project: Examined microsatellites of song bird dialects in the local house finch population in order to determine how and why song birds develop dialects and assess genetic relatedness of the Williamstown population.
Currently: Looking for a research position in Ann Arbor Michigan. Plans to go to graduate school for evolutionary biology.

Student: Peter Holland ('05)
Advisor: Heather Williams
Project: Studied the song "vocabulary" in local house finch population. Captured finches, banded their legs and observed territorial behavior and recorded songs.
Currently: Senior at Williams. Art History and Studio major with plans to apply to Medical school.

Student: Maria Kerr ('05)
Advisor: Heather Williams
Project: Investigated whether there was a correlation between male zebra finch courting song and their movement during the production of this song.
Currently: Senior at Williams. Biology major.

Student: Michelle Kron ('04)
Advisor: Steve Zottoli
Project: Investigated the use and removal of the telencephalon in the cunner fish as a method of anesthesia.
Currently: Beginning a M.D. PhD. Program at the University of Michigan.

Student: Rui Nie ('05)
Advisor: Betty Zimmerberg
Project: Studied rat pup vocalizations and adult line differences in the novelty suppression feeding paradigm.
Currently: Senior at Williams. Psychology major, Neuroscience concentrator.

Student: Kristin Sageser ('04)
Advisor: Betty Zimmerberg
Project: Investigated changes in play behavior in rats after experiencing maternal separation.
Currently: Starting a job in Neuroscience research at Albert Einstein school of Medicine and planning to apply to graduate school in neuroscience next year.

Student:Kameron Shahid ('04)
Advisor: Paul Solomon
Project: Interviewed patients using seven minute screen.
Currently: Applying to medical school.

Student: John Rudoy ('05)
Advisor: Noah Sandstrom
Project: Examined the effects of estrogen on attentional abilities in rats.
Currently: Senior at Williams. Psychology major, concentrating in Neuroscience.

Student: Molly Wasserman ('04)
Advisor: Noah Sandstrom
Project: Examined the effects of testosterone/estradiol on memory retention in
rats.
Currently: Working for a Pharmaceutical company in Minneapolis. Considering applying to medical school.

Student: Meredith Olson
Advisor: Paul Solomon
Project: Interviewed patients using 7 minute screen
Currently: Looking for research positions in Neuroscience and planning on attending graduate school.


APPENDIX II: ABSTRACTS OF NEUROSCIENCE HONORS THESIS

Dose-dependent Effects of Estradiol on Learning Following 4-vessel Occlusion

Nicolas Bamat
Advisor: Noah Sandstrom

Ischemic events such as cardiac arrest and stroke affect over a million people in the United States every year. Cognitive deficits following such events are often associated with damage to the hippocampus. Using animal and cell culture models, estradiol administration has been shown to protect the hippocampus from such damage. Furthermore, in male rats it has been shown in that estrogen-mediated neuroprotection from ischemic injury can be demonstrated in behavioral models of learning and memory dependent on the hippocampus. The present study examined whether this behavioral neuroprotection is dependent on sex or the level of estradiol using a 2 (Sex: Male and Female) x 3 (Hormone: Placebo, Low Estradiol (.25mg/pellet), High Estradiol (2.5mg/pellet)) x 2 (Surgery: Ischemia and Sham) design. Gonadectomized male and female rats were implanted with 21-day time-release hormone pellets on PND 35 and experienced transient global ischemia via four-vessel occlusion or a sham surgery two weeks later. A week following surgical procedures, all rats were tested on a non-hippocampally dependent visible platform Morris Water Maze (MWM) variant and then on the hippocampally dependent hidden platform MWM. Blood samples were obtained via cardiac puncture to determine plasma estradiol levels on the day of ischemia. Estradiol levels were quantified using radioimmunoassay (RIA). No sex differences were observed in either the visible or the hidden platform tasks. Subjects treated with high estradiol performed significantly worse than those pretreated with placebo capsules on the visible platform task. Sham subjects receiving high estradiol performed significantly worse than subjects receiving low estradiol on the MWM. However, this result was reversed in ischemic subjects, with high estradiol subjects outperforming subjects from the low estradiol group. These findings suggest a differential dose-dependent response in performance on the MWM in ischemic and non-ischemic animals.

The Effect of Nerve Damage on Song Representation in the adult Zebrafinch Brain

Gregory Del Prete
Advisor: Heather Williams

As closed-ended learners, male zebra finches normally go through one song learning process, which concludes with song crystallization at about 90 days of age. Thereafter, the bird will sing only this crystallized song unless some form of outside intervention induces song plasticity. The closed-ended song learning process results in a representation of a bird’s own individual song in the high vocal center (HVC) and other song production nuclei in the brain. Thus, a recording of a bird’s own song will illicit a more robust response from auditory response neurons within HVC than will any other sound stimuli. The bird will reenter a period of song plasticity and crystallized song will change, however, if one half of the bird’s vocal organ, the syrinx, is uncoupled from the brain. A region of the brain that is normally required for proper song learning, but not necessary for adult song production, LMAN, must be intact in order for this nerve-damage-induced plasticity to occur. This suggests that song plasticity corresponds with plasticity in the brain itself. In this study, the right half of the syrinx was denervated in adult male zebra finches, causing the subjects to alter their crystallized songs. Recordings of each subject’s own song before and after nerve injury were presented to each bird after song recrystallized. In none of the six subjects studied did HVC respond most strongly to intact, crystallized song. All six birds showed the greatest HVC response for one of their own songs recorded after nerve damage, and five of the six subjects showed increased responses to songs that contained new features not seen in original song. These results suggest that, under certain circumstances, brain plasticity is possible in male zebra finches during a phase of life when this normally would not be the case.

Identified Neuron Activity in a Freely Moving Crayfish

Shauna Dineen
Advisor: Steve Zottoli

The posture of the crayfish abdomen is regulated by the antagonistic action of the flexor and extensor muscles. Muscle movements are controlled by premotor interneurons that coordinate firing activity in the motor neurons innervating these muscles. The nerve innervating the superficial flexors contains the axons of the 6 motor neurons - 5 excitatory (SFMN1-4,6) and 1 inhibitory (SFMN5). Although previous studies based on interneuron stimulation have suggested that the 5 excitatory neurons will fire during abdominal flexion and the 1 inhibitory neuron will fire during extension, no study has yet correlated individual neuron activity with behavior in a freely moving crayfish (Procambarus clarkii).
Two wire electrodes were placed on the nerve innervating the superficial flexor muscles of the fourth abdominal segment. The wires were fastened to a plate anchored on adjacent sterna and connected to pins cemented on the dorsal side of the crayfish carapace. Neuron activity and the six motor neurons could be monitored and correlated with behavior of the freely moving crayfish.
Simultaneous recording of nerve activity and behavioral responses indicate that the smaller excitatory neurons (SFMN1-4) are responsible for fine postural adjustments while the large excitatory neuron (SFMN6) contributes to the rapid flexion of the abdomen by firing in large bursts that phasically increase tension in the superficial flexors. The inhibitory neuron, SFMN5 rarely fires except during large bursts of SFMN6 activity, indicating its role in retarding the rapid rate of increasing muscle tension.
Thus, these results suggest that the double hook electrode technique can be used to record the activity of individual and identifiable neurons within the superficial branch of a freely moving crayfish. Furthermore, this technique can be adapted for regeneration studies. Specifically, long-term recording from identified neurons can be used to study the physiological basis of nerve damage and regeneration.


The Effects of Gestational and Lactational Iron Deficiency on the Development of Anxiety Behavior in Rats

Rosemary Eseh
Advisor: Betty Zimmerberg

Studies on the behavioral effects of iron deficiency (ID) have focused on the postnatal or adult periods. In addition, little attention has been paid to ID effects on affective behavior although alterations in the relevant neurotransmitter system, GABA, have been documented. In this experiment, two measures of anxiety, ultrasonic vocalizations (USV) and elevated plus maze (EPM) were used to investigate the consequences of maternal ID. Female Long-Evans rats were assigned randomly to one of three diet groups: low iron (10-20ppm Fe), standard (60ppm Fe) or lab chow (250ppm Fe) diet. Diets started seven days prior to mating and continued until ten days after birth (PN10), after which all dams were iron replete with the lab chow diet. USVs after maternal separation was used to test for anxiety in neonates and EPM was used for adults. Maternal behavior, growth, and activity were also assessed. Blood samples taken from pups on PN10 revealed a significant decrement in serum iron and a compensatory increase in total iron binding capacity in the low iron groups compared to the control groups. Relative to the two control groups, the low iron group weighed less on PN1, and this weight difference persisted in adulthood. In neonates, the rate of USVs in the low iron group was significantly higher than the two control groups, and their general activity was significantly less than the controls’. Maternal behavior was not significantly different across groups. By adulthood, anxiety behavior and motor activity in the low iron group were comparable to controls. This study shows that prenatal deficiency results in anxiety behavior, low weight and decreased activity. These deficits, except for weight, were reversed with iron repletion. Future research is needed to elucidate the mechanism of ID effects on anxiety and the persistent weight deficit.

Microsatellite Isolation from the House Finch (Carpodacus mexicanus): A Protocol for Implementing Microsatellite Markers in the Study of Cultural Evolution.

Tory Hendry
Advisor: Heather Williams

In order to develop a molecular marker based protocol for the study of song dialects and cultural evolution we attempted to isolate microsatellite loci from the house finch, Carpodacus mexicanus. We tested a new procedure for this isolation, involving multiple microsatellite enrichment methods and the use of the non-palindromic restriction enzyme BseYI to create unique sticky ends. This procedure was not successful, as we were not able to isolate any new loci, and it showed little promise for future work. We also tested both microsatellite and non-microsatellite genetic markers on a sample of birds from two different dialect regions to determine their relatedness and found that these two types of markers did not behave similarly. Using microsatellite loci we were able to determine that differences in song pattern do not serve as a barrier to interbreeding between neighboring populations in this species. We also found intriguing evidence that eastern house finch populations may be lacking in genetic diversity and genetically divergent on a macrogeographic scale.

HsP27 is Required for Neural Development in the Zebrafish.

Courtney Juliano
Advisor: Lara Hutson

Heat shock proteins (HSP’s) are highly conserved proteins whose expression is induced in response to heat shock. They act as molecular chaperones by helping to fold or re-fold proteins after a thermal event and by targeting misfolded proteins to degradative machinery within the cell. One particular HSP that is highly conserved in vertebrates is the small HSP27. This protein functions in neuronal and non-neuronal differentiation, conveying resistance to apoptosis, and providing protection against oxidative stress.
Importantly, HSP27 is also implicated in actin regulation in a variety of cell types, functioning primarily as an actin-capping protein or as an actin-stabilizing protein. HSP27 localizes to dynamic structures at the leading edge of motile cells where the protein’s association with actin translates to a broader role in cell motility. More recent evidence points to the fact that HSP27 is present in vertebrate neuronal cells and, more specifically, in neuronal growth cones. Growth cones navigate by translating cues from the environment into changes in the actin and/or microtubule cytoskeleton, allowing individual axons to migrate along specific trajectories.
Based on its role as an actin regulatory molecule, it seems likely that HSP27 may mediate axon outgrowth and/or guidance by regulating the actin dynamics in neurons. I have examined the expression of HSP27 in zebrafish embryos over the course of development and found that it is expressed in neurons throughout the nervous system. In addition, I have performed loss-of-function analysis, which revealed that, in the absence of HSP27, axon outgrowth defects are observed. In summary, the results are consistent with HSP27 playing a role in axon outgrowth.

 

Dibutytyl-cAMP Effects Spinal Cord Regeneration in the
Goldfish (Carrasius auratus).

Michelle Kron
Advisor: Steve Zottoli

A spinal cord crush at the spino-medullary level results in the loss of function below the wound in goldfish, Carassius auratus. Miraculously these animals recover swimming, feeding, equilibrium and startle responses a few months after injury (Zottoli and Freemer, 2003). However, not all central neurons (i.e. nerve cells confined to the central nervous system) contribute to this behavioral recovery. For example, a pair of identifiable nerve cells, the Mauthner cells (M-cells), morphologically regenerate after injury but the growth follows aberrant pathways and ultimately does not contribute to the recovery of startle responses that it is known to initiate in normal fish.
A pair of Mauthner cells (M-cells) are located on either side of the midline in the medulla oblongata of the goldfish brain. These neurons can be identified by their large size and characteristic extracellular negative field recorded near the axon hillock-initial segment region. This initial region is encased in a specialized structure called the axon cap, a structure surrounded by a ring of glial cells. The axon cap can be divided into a central and peripheral zone based on the input types each portion receives.
Cyclic adenosine monophosphate (cAMP) and its analogues mediate a broad spectrum of events such as promoting neurite growth (Cai et al., 2001) and act as axon guidance cues (Song et al., 1998). Recent studies in larval zebrafish have demonstrated that dibutyryl-cAMP (db-cAMP), a membrane permeable analogue, injected on the plasmalemma of damaged M-cells “converts” the cell from a non-regenerating state to a regenerating one. In fact, the cAMP activated growth is directed caudally and results in the return of function (Bhatt et al., in press). In this study, we first verified that we could reliably inject a visible tracer, Horse Radish Peroxidase (HRP) into specific portions of the axon cap. Using the information gained through HRP injection, we localized db-cAMP injections to specific portions of the cap region of damaged M-cells in the adult goldfish to determine whether db-cAMP could facilitate morphological and ultimately functional regeneration.
We saw that db-cAMP stimulates all injected M-axons to regenerate and that db-cAMP enhances growth of injected M-axons past the wound site. Most remarkable is that this growth occurred in 20 days compared to the lesser growth by control M-axons in 30 days. Our results support the findings of Bhatt et al. (in press) that cAMP can enhance M-cell regeneration and indicate that cAMP also has significant effects in an adult model. These results have profound implications for possible reversal of abortive regeneration and possible functional regeneration in mammals.

Effects of Early Isolation-Induced Stress on Play Behavior and Vocalizations in Rats.

Kristin Sageser
Advisor: Betty Zimmerberg

Early childhood deprivation is associated with an increased risk of attachment and other social behaviors. The consequences of exposure to early stress in rodents have been used to model the effects of child neglect in humans. In this thesis, we examined the effects of early stress on the development of play and communicative behaviors. We first compared the model of early stress used in this laboratory (Early Deprivation, ED), in which pups are isolated individually on PN2-14 while the dam is left with a subset of littermates in the nest, to the Maternal Separation (MS) model, in which the dam is isolated in a novel cage while the pups are separated together. Undisturbed, control litters were used as well. We hypothesized that both models would cause subsequent alterations in play behavior and vocalizations at one month of age, but that these effects may differ due to the accentuated maternal factors in the MS model. Maternal behavior upon reunion with the isolated subjects was significantly increased in the MS condition, and less dramatically increased in the ED condition. ED experience significantly increased levels of play in behaviors such as attacking, boxing, and evading. Maternal Separation also significantly increased levels of play in measures such as attacking and evading, but these behaviors were significantly less than ED levels. Minor alteration were also seen in vocalizations as a result of ED experience. Since we found effects of a two-week separation in Experiment 1, in Experiment 2, we looked to see if there was a critical period of neural development responsible for these changes by confining the separation experience to either the first or second week. Separation during Week 1 produced increased levels of play that exceeded elevations resulting from two-week separation to Week 1 and two-week separations. These results indicate that the early stress affected play behavior and vocalizations, but these effects varied with the paradigm of timing and separation.



APPENDIX III: ESSEL SUPPORTED PUBLICATIONS AND PRESENTATIONS

* indicates student author

Lara Hutson

Publications
SHutson LD, Jurynec MJ, Yeo S-Y, Okamoto H, and Chien C-B (2003). Two divergent slit1 genes in zebrafish. Developmental Dynamics. 228(3):358-69.

Invited talks
"Genetic and environmental influences on growth cone behavior in the zebrafish." Connecticut Valley Zebrafish Meeting, Amherst, MA. Dec, 2003.

Presentations
Harrison KL, *Juliano CJ, Hutson LD (2004) Transcriptional regulation of HSP27, HSPB2 and HSPB3 in developing zebrafish. Molecular Chaperones and the Heat Shock Response. Cold Spring Harbor Laboratory.


Noah Sandstrom

Publications
Sandstrom, NJ, & Williams, CL (2004). Spatial memory retention is enhanced by acute and continuous estradiol replacement. Hormones & Behavior, 45, 128-135.

Presentations
Sandstrom, NJ & *O’Brien, JL (June, 2003). Estradiol protects against ischemia induced deficits in water maze performance of male rats. Society for Behavioral Neuroendocrinology. Cincinnati, OH.

Sandstrom, NJ & *O’Brien, JL (October, 2003). Pretreatment with 17?-estradiol, but not 17?-estradiol, protects against global ischemia-induced spatial learning deficits in male rats. Society for Neuroscience, New Orleans, LA.

Luis Schettino

Publications
Schettino, L. F., Adamovich, S. V. and Poizner, H. (2003). The Role of Visual Feedback and Object Shape during Grasping. Experimental Brain Research, 151:158-66.

Schettino, L. F., Rajaraman, V., Jack, D., Adamovich, S. V., Sage, J. and Poizner, H (2004). Deficits in Hand Preshaping in Parkinson’s Disease. Neuropsychologia, 42: 82-94.

Paul Solomon

Publications
Solomon, P.R., Budson, A.E (2003). "Clinical Symposia: Alzheimer's Disease." Dannemiller Memorial Educational Foundation. 54 (1): 1-44.

Solomon, P.R. & DeVeaux, R. (2003). "Gingko and Memory." Journal of the American Medical Association, 289 (5): 546-548.

Solomon, P.R. (2003). "Repeated MMSE: A screening instrument for Alzheimer's Disease." Journal Watch Neurology, 5 (5):35.

Murphy, C.A., Solomon, T.M., *Im, A., *Stashwick, C. & Solomon, P.R. (2003) "Is Alzheimer's Disease being diagnosed earlier: A 10-year retrospective study." International Psychogeriatrics, 15 (supplement 2): 89.

Solomon, P.R., Ruiz, M.A., & Murphy, C.A. (2003). "The Alzheimer's Disease Caregiver Questionnaire: Initial Validation of a Screening Instrument." International Psychogeriatrics, 15 (supplement 2): 87.

Budson, A.E., Simons, J.S., Sullivan, A.L., Beier, J.S., Solomon, P.R., Scinto, L.F., Daffner, K.R., & Schacter, D.L. (2004). "Memory and emotions for the 9/11/01 terrorist attacks in patients with Alzheimer's disease, mild cognitive impairment, and healthy older adults." Neuropsychology, 18: 315-327.
Note: this article was also featured in an article in the APA Monitor (May 2004)

Tolar, M., Cassella, J., Villalobos, A., Bednar, M., Weaver, J., Davidson, W., Gibbs, M, Weiner, M., Solomon, P.R. (2004). "GABA A receptor inverse agonist fails to improve cognition in Alzheimer's disease patients." Neurology, 122: 315.

Heather Williams

Publications
Williams H, *Connor DM, *Hill JW. (2003) Testosterone decreases the potential for song plasticity in adult male zebra finches. Hormones and Behavior. 44: 402-12.

Invited talks
"Song lateralization re-examined: Central and peripheral influences." Eighth Annual Bird Song Workshop, The Rockefeller University Field Research Center. NY, NY.JULY 2003.

Steve Zottoli

Publications
Zottoli, S.J., *Burton, O.T., *Chambers, J.A., *Eseh, R., *Gutiérrez, L.M. and
*Kron, M.M. (2003). Transient Use of Tricaine to Remove the Telencephalon has no Residual Effects on Physiological Recordings of Supramedullary/Dorsal
Neurons of the Cunner, Tautogolabrus adspersus Biol. Bull., 205: 211-212.

Zottoli, S.J. and Freemer, M.M. (2003). Recovery of C-starts, equilibrium and targeted feeding after whole spinal cord crush in the adult goldfish, (Carassius auratus). Exp Biol., 206:3015-3029.

Invited talks
"The Neuronal Basis of Functional Recovery after Spinal Cord Injury." University of Texas, San Antonio. San Antonio, Texas. March, 2004.


Betty Zimmerberg

Publications
Zimmerberg B., *Kim J.H., *Davidson A.N, and *Rosenthal A.J. (2003) Early Deprivation alters the vocalization behavior of neonates directing maternal attention in a rat model of child neglect. Annals N.Y. Acad. Sci., 1008:308-313.

Invited Talks
"Brain Soup: How Nature and Nurture Work Together.” Williams College Summer Program for Teachers. July 2003.

"Development: Experience Counts." REU Program in Neuroscience, SUNY-Albany, Albany, NY. July, 2003.

"Neurosteroids and the development of sex differences in anxiety behaviors." The 5th Pharmacology Biochemistry and Behavior Meeting, Morzine, France. January, 2004.

Research Presentations
*Nie, R., Zimmerberg, B., Garcia, VA.L., Winniger, V. and Brunelli, S.A. (2003, Nov.). Long term effects of selective breeding for infantile USV in rat pups on novelty suppressed feeding in adulthood”. Presented at the International Society for Developmental Psychobiology annual meeting, New Orleans, LA.

Zimmerberg, B., *Sageser, K.E. (2003, Nov) "Comparison of early stress models on subsequent alterations in social and communicative behavior in rats." Presented at the International Society for Developmental Psychobiology annual meeting, New Orleans, LA.

*Bamat, NA, *Kron, M.M., *Schulte, A., Brunelli, S.A. and Zimmerberg, B. (2003, Nov). Acute and long-term behavioral effects of toluene in neonatal rats selectively bred for high or low vocalizations. Presented at the Society for Neuroscience annual meeting, New Orleans, LA.


APPENDIX IV: NEUROSCIENCE FACULTY ACCOMPLISHMENTS

Professor Professor Lara Hutson

In this, her first year at Williams, Dr. Hutson taught two new courses, Cell Dynamics (BIOL 410) in the fall and Mechanisms of Nervous System Development (BIOL 310) in the spring. In addition, she started work on her research focus, HSPs (heat shock proteins, here at Williams with the help of four research students: Courtney Juliano ’04, an honors student, who investigated the role of the small heat shock protein HSP27 in axon outgrowth in the zebrafish; Krista Harrison ’04, winter study and spring semester independent study student, who investigated the transcriptional regulation of the small heat shock proteins HSP27, HSPB2, and HSPB3; Kathryn Fromson ’06, research assistant, who studied adaptation of the heat shock response; and Meghan Ryan ’06, research assistant, who worked on an assay to test for phosphorylation of HSP27. Ms. Harrison presented her work at the Cold Spring Harbor Laboratory meeting on Molecular Chaperones and the Heat Shock Response, May 5-9. Ms. Fromson will be presenting some of her work at the 6th International Meeting of Zebrafish Development and Genetics, July 29-Aug. 2, in Madison, WI. Ms. Fromson and Ms. Ryan will continue with their research this summer, along with three new students who will be joining the lab.

Professor Noah Sandstrom

Assistant Professor Noah Sandstrom conducted research examining hormonal modulation of cognitive processes including attention and memory. Work with students during the summer of 2003 investigated the influence of androgens on memory retention and will be presented at the Society for Neuroscience conference next fall. Along with his thesis student Nick Bamat (‘04), he continued to examine the extent to which estrogens may be neuroprotective. Using a variety of surgical, behavioral, and histological techniques, they have shown that estrogens can minimize the damage that results from transient global ischemia and gained some intriguing insights in to the ways in which hormone dose influence outcome.

Dr. Sandstrom attended a number of conferences including the annual meetings of the Society for Behavioral Neuroendocrinology and the Society for Neuroscience where he presented two papers with Jessie O’Brien (Williams, ’03). He also took students from his Hormones & Behavior course to a Behavioral Neuroendocrinology symposium at the University of Massachusetts at Amherst. In the past year, Dr. Sandstrom has served as an ad hoc reviewer for Behavioural Brain Research and has published a paper in Hormones & Behavior.

Students in Dr. Sandstrom’s upper-level neuroscience course, Hormones & Behavior, conducted novel empirical research investigating changes in memory across pregnancy. They developed an object recognition memory task and tested control and pregnant female rats during each of the three weeks of pregnancy. Though the data were quite variable, it was suggestive of a decline in memory during the final two weeks of pregnancy. In addition, Dr. Sandstrom developed a new Winter Study course, Rat Olympics, in which students discussed Behaviorism. As part of this course, student worked in teams to train rats in several “events” including the long jump, an obstacle course, and basketball.


Professor Paul Solomon

Professor Paul Solomon continued to serve as Clinical Director of the Memory Clinic and Clinical Neuroscience Research Center. He is currently principle investigator on 12 research grants from groups including the National Institute on Aging and several private research foundations. These grants are primarily for the evaluation of new drugs to treat Alzheimer's disease and related disorders. He gave more than 30 invited lectures at Medical Schools, Universities, and national and local meetings.


Professor Heather Williams

Professor Heather Williams attended the annual bird song workshop at the Rockefeller University Field Research Center and presented work that formed part of Jess Tierney’s (’03) honors thesis, which contributed to defining the basis of laterality in vocal production in songbirds. In the fall, a paper on the role of testosterone in limiting plasticity in the learned song of adult male zebra finches, co-authored with two former students, Denise Connor (’99) and Jennifer (Danforth) Hill (’97) appeared in Hormones and Behavior. The paper was featured on BioMedNet, a web site that highlights a few papers each week from among a wide variety of journals. Prof. Williams’ lab continued its investigation of the neural basis of song learning. Maria Kerr ('05) pursued the question of whether zebra finches learn to time their courtship dances to their songs and Whitney Johnson (’06) continued a project initiated by Courtney Hunter (’03) looking into the question of whether the degree of variability and flexibility in a bird’s song is inherited. Two honors students, Greg Deplete and Tory Hendry (both ’04) put in long hours in the lab. Greg used multi-unit recordings from the song centers in the brains of adults to examine adults’ potential for brain and behavioral plasticity, and Tory used microsatellite and dominant markers to investigate the genetic structure of house finch populations.

Prof. Williams co-taught Introduction to Neuroscience with Professor Betty Zimmerberg of the Psychology Department in the fall. With the help of Dr. Luis Schettino, they upgraded and revised the laboratory program so that students receive an introduction to all aspects of neuroscience using a variety of animal models. In the spring, Prof. Williams offered the Animal Behavior class to a large flock of students, who investigated red-winged blackbird behavior during the traditional early morning hours. They found that males responded more aggressively to the songs of neighbors than to the songs of strangers – a result that contradicts those obtained in the past, and may be due to intense competition for territories that extended throughout the spring season - long after territories have usually been established.

Prof. Williams served as a reviewer for the National Institutes of Health, and reviewed manuscripts for several journals.


Professor Betty Zimmerberg

Professor Betty Zimmerberg continued her research on the neural mechanisms underlying behavioral responses to fearful situations and how experiences of early deprivation, like child neglect, might impair developing coping behavior. The research was supported by a grant from the National Science Foundation, entitled “Early Experience and Neurosteroid Response to Stress”. During the summer, Kristin Sageser ’04 continued work on this project as part of her senior thesis, with an emphasis on the effects of early deprivation on the development of play behavior. Alyssa Fluty ’05 and Rui Nie ‘05 were also summer research assistants, working on a new project using a novel animal model of anxiety, rats bred for high and low rates of vocalization after brief maternal separation. In November, both Kristin and Rui accompanied Zimmerberg to New Orleans to present their research at the International Society for Developmental Psychobiology annual meeting (“Comparison of early stress models on subsequent alterations in social and communicative behavior in rats” and “Long term effects of selective breeding for infantile USV in rat pups on novelty suppressed feeding in adulthood”, respectively). Also, in New Orleans, at a companion meeting, the Society for Neuroscience annual meeting, was Nick Bamat ’04, presenting research conducted in Zimmerberg’s Drugs and Behavior course (Psyc 312) with Michelle Kron ’04 and Andrew Schulte ’03 entitled “Acute and long-term behavioral effects of toluene in neonatal rats selectively bred for high or low vocalizations”. Rosemary Eseh ’04, the other senior thesis student in Zimmerberg’s lab, investigated the behavioral effects of iron deficiency during pregnancy in rats. Rosemary won a coveted NIH travel award to present her research this summer in Bordeaux, France, at the next meeting of the International Society for Developmental Psychobiology.

Betty Zimmerberg taught Introduction to Neuroscience in the fall and Drugs and Behavior in the spring. Zimmerberg was an external reviewer for the Psychology Departments at Bard and Lafayette Colleges, and served on the Woodrow Wilson Foundation Science Advisory Committee. Other professional activities included serving on the editorial board of Developmental Psychobiology, on the steering committee of N.E.U.R.O.N and as the chair of the membership committee of the International Behavioral Neuroscience Society. Zimmerberg was also was a grant reviewer for the Behavioral Neuroscience Program at the National Science Foundation and reviewed manuscripts for Behavior and Genetics, Developmental Psychobiology; Behavioral Neuroscience; Alcoholism: Clinical and Experimental Research; Physiology and Behavior; Psychological Reports: Perceptual and Motor Skills; and Neuropharmacology. Zimmerberg was also a co-PI with on two grants funded by the National Science Foundation out of the University of Albany – SUNY. And she really enjoyed teaching in the Williams College Summer Program for Teachers, giving a class entitled “Brain Soup: How Nature and Nurture Work Together.


Professor Steve Zottoli

Professor Steve Zottoli taught Neurobiology (Biology 304) in the fall and Animal Physiology (Biology 205) in the spring. An independent laboratory project was integrated into the laboratory of both courses. He also continued to direct the Howard Hughes Medical Institute (HHMI) grant to Williams College. Additionally, he has maintained is position as the President of The Grass Foundation, a not-for-profit philanthropic organization that funds various programs in neuroscience, and is also on the External Advisory Board for Biomedical Research Infrastructure Network (BRIN) program for the state of New Mexico, funded by NIH

Last summer he directed the Williams College-Marine Biological Laboratory
(MBL) program, which is funded by Howard and Nan Schow and HHMI and Essel Foundation grants to Williams. Six students spent 9 weeks at the MBL attending lectures, seminars and participating in an original research project. At the MBL he served as a member of the search committee for a Chief Academic and Scientific Officer at the MBL. While busy with this he also served as a faculty member in the Summer Program in Neuroscience, Ethics and Survival course at the MBL.


APPENDIX V: OUTSIDE SOURCES OF FUNDING


Professor Betty Zimmerberg

6/1/03-8/31/03. "Research Experience for Undergraduate." National Science Foundation Funding. $10,000
Co-PI, (PI: Cheryl A. Frye, Ph.D.)

4/1/04-3/31/04. Increasing U.S. Participation in 5th Pharmacology, Biochemistry, &
Behavior Conference. National Science Foundation. $10,000.
Co-PI, (PI: Cheryl A. Frye, Ph.D.)

Professor Paul Solomon

Alzheimer's Disease Cooperative Study. "A Randomized, Double-Blind, Placebo Controlled Trial to Evaluate the Safety and Efficacy of Vitamin E and Donepezil HCL (Aricept®) to Delay the Clinical Progression from Mild Cognitive Impairment to Alzheimer's Disease.

Alzheimer's Disease Cooperative Study. "A Randomized, Double-Blind, Placebo-Controlled Trial to Evaluate the Safety and Efficacy of Divalproex Sodium Therapy for Agitation in Nursing Home Residents with Probable or Possible Alzheimer's Disease." National Institute on Aging.

Alzheimer's Disease Cooperative Study "A Phase IV Study of the Treatment of Agitation/Psychosis in Dementia/Parkinsonism (TAP/DAP)." National Institute on Aging.

"A Phase II Pilot Study of the Safety, Tolerability and Pharmacokinetics / Pharmadynamics of Alzhemed in Patients with Mild to Moderate Alzheimer's Disease." Neurochem.

"A Double - Blind, Placebo Controlled, Dose-Finding Study Evaluating the Safety and Efficacy of MKC-231, 80mg, b.i.d., and 20 and 80 mg q.d. in the treatment of Mild to Moderate Alzheimer's Disease." Mitsubishi Pharmaceuticals.

Alzheimer's Disease Cooperative Study. "A Multi Center, Randomized, Double-Blind, Placebo Controlled trial of Simvastatin to slow the Progression of Alzheimer's Disease." National Institute on Aging.

"A Phase II Double-Blind, Randomized, Dose-Ranging, Placebo-Controlled, Multicenter, Safety and Efficacy Evaluation of Three Doses of NS 2330 in Patients with Mild to Moderate Dementia of the Alzheimer's Type." Boehringer-Ingleheim Pharmceuticals.

Alzheimer's Disease Cooperative Study. "A Randomized Double Blind Placebo Controlled Trail of Valproate to Attenuate the Progression of Alzheimer's Disease (AD)." National Institute on Aging.

"A One-Year, Multicenter, Randomized, Double- Blind, Placebo-Controlled Evaluation of the Efficacy and Safety of Donepezil Hydrochloride (E2020) in Subjects with Mild Cognitive Impairment." Easai/Pfizer Pharmaceuticals.

"A Randomized, Double-Blind, Placebo- Controlled, 4-Period Cross-Over Pilot Study of the Safety and Efficacy of Multiple Doses of ABT-089 in Subjects with Alzheimer's Disease." Abbott Pharmaceuticals.

"A Dose-Ranging, Placebo-Controlled Study of SL65.0155-10 at the doses of 0.5 mg, 2 mg, and 8 mg for 12 Weeks in Patients with Mild-to- Moderate Alzheimer's Disease." Sanofi-Synthabolab.

"A Multi-Center, Randomized, Open-label Study Evaluating the Effects of MKC-231, 80 mg b.i.d., vs Aricept, 5 mg or 10 mg, on Adrenal Function in Patients with Mild Alzheimer's Disease." Mitsubishi Pharmaceuticals.

 


APPENDIX VI: ESSEL-SPONSERED COLLOQUIUM SPEAKERS

October 27th, 2003
Sue Carter, Ph.D.
Professor, Department of Psychiatry,
University of Illinois, Chicago, Il.
"Monogamy and Oxytocin, A Love Story"

March 8th, 2004
Craig Van Horne, M.D., Ph.D.
Co-Director of the Movement Disorders Clinic in Boston, Neurosurgeon
Harvard Medical School, Cambridge, Ma.
"Surgical Treatment Strategies for Parkinson's Disease, Current Concepts and Future Directions."

March 12th,, 2004
Gianluca Gallo, Ph.D.
Professor, Department of Biology
Drexel University, Philadelphia, Pa.
"Role of RhoA-ROCK-Myosin II in Axon Consolidation and Guidance."

April 7th, 2004
V.S. Ramachandran, Ph.D.
Director of the Center for Brain and Cognition and Professor, Psychology Department and the Neurosciences Program.
University of California, San Diego, Ca.
"What Neurology Can Tell Us About Human Nature, Synesthesia, and the Meaning of Art."

April 26th, 2004
Zaven Kaprielian, Ph.D.
Associate Professor, Departments of Pathology and Neuroscience
Albert Einstein School of Medicine, Yeshiva University, New York, NY.
"A Role for VEMA/VEM-1, A Novel Membrane-Associated Protein, in Axon Guidance at the Midline of the Developing CNS."


APPENDIX VII: YEAR 12 BUDGET AND EXPENDITURES

Category Expenditures Year 12 Budget Year 12
Undergraduate Summer Program    
      Students   ($3,300X11)* 25,610 33,000

     Research Expenses ($4,000X6)**

24,000 20,000
      Faculty Support ($4,000X5 )*** 20,000 16,000
Essel Director3 8,000 8,000
Senior Essel Fellow 34,843 35,096
Junior Essel Fellow 22,276 22,497
Fringe Benefits**** 21,559 16,114
Senior Fellow Research Expenses 4,000 4,418
Total 160,288***** 155,125

* The college-mandated weekly stipends continued to be $330, $30 more per week than in the original budget. Also, some students did not stay for the entire summer; two were only here for two weeks, one for three, and two more for five each. Additional students received support from other sources such as NSF or the Hughes Foundation.

**Another new fulltime Neurobiology professor was hired, Lara Hutson, bringing our faculty to 6 (budgeted for 5).

***The Director receives a $4000 stipend and $4000 summer support.

**** The College increased the mandated fringe benefits for the Junior and Senior Essel Fellows from original budget of 21% and 29%, respectively, to 32% for both.

*****We are happy to apply $5,163 of our savings from last year to cover the additional costs of this year that resulted from increases in fringe benefits and the addition of two new full time professors. We have considered these increased costs and the proposed additions of two new budget items (student travel support funding and support to attend the NARSAD and Society for Neuroscience Conferences) in our proposal for 2004-2009. We would be happy to carry over our remaining $1,509 to cover an overlap this summer of our new Junior Essel person with Laurel Bifano, our current fellow, for a better training transition.

APPENDIX VIII: UPPER LEVEL NEUROSCIENCE CLASSES AND EMPIRICAL PROJECTS

NSCI 401 - Topics in Neuroscience - Paul Solomon

Neuroscientists explore issues inherent in the study of brain and behavior. The overall objective of this seminar is to create a culminating senior experience in which previous course work in specific areas in the Neuroscience Program can be brought to bear in a synthetic, interdisciplinary approach to understanding complex problems. The specific goals for students in this seminar are (1) to evaluate original research and critically examine the experimental evidence for theoretical issues, and (2) to gain an understanding of this discipline through group work, and oral presentations. Topics and instructional formats will vary somewhat from year to year, but in all cases the course will emphasize an integrative approach in which students will be asked to consider topics from a range of perspectives including molecular, cellular, systems, behavioral and clinical neuroscience. Previous topics have included memory, autism, depression, alcoholism, language development, and stress. Format: student-led discussions and presentations, three hours a week. Evaluation will be based on presentations, participation in class discussion, and a term paper.

BIOL 204 - Animal Behavior - Heather Williams

Making sense of what we see while watching animals closely is both an enthralling pastime and a discipline that draws on many aspects of biology. Explanations can be found on many levels. Evolutionary theory tells us why certain patterns have come to exist, molecular biology can help us understand how those patterns are implemented, neuroscience gives insights as to how the world appears to the behaving animal, and endocrinology provides information on how suites of behaviors are regulated. The first part of the course focuses upon how descriptive studies provide the basis for formulating questions about behavior as well as the statistical methods used to evaluate the answers to these questions. We then consider the behavior of individuals, both as it is mediated by biological mechanisms and as it appears from an evolutionary perspective. The second half of the course is primarily concerned with the behaviors of groups of animals from a wide variety of vertebrate and invertebrate species, concentrating upon the stimuli, responses, and internal mechanisms that maintain social systems and on the selection pressures that drive animals toward a particular social system. Format: lecture/laboratory, six hours per week. Evaluation will be based on examinations, lab reports, and a research paper.


BIOL 205 - Physiology - Steve Zottoli

This lecture-based course examines principles, patterns, and mechanisms of biological function from the level of cells and tissues to the whole organism. The themes of the course include structure and function, mechanisms of regulation, control and integration, and adaptation to the environment. Examples of these themes are taken from a wide variety of organisms with a focus on vertebrates. Laboratories provide practical experience in measurement and experimental elucidation of physiological phenomena and functional analysis of gross structure. Evaluation will be based on hour exams, laboratory practicals, laboratory reports, and a final exam.

BIOL 304 - Neurobiology - Steve Zottoli

This course is concerned with understanding the biology of the nervous system, focusing primarily on the cellular bases of neuronal function. Lectures will cover such topics as nerve resting and action potentials, ion channels, neurotransmitters and synapses, and the neural correlates of behavior in organisms with simple nervous systems. Reading original research papers and discussing them constitutes an important part of the course. Some of the topics that may be covered include: transmitter release mechanisms, ion permeation through channels, plasticity in the nervous system, and various clinical disorders. Laboratories are designed to introduce the students to modern techniques in neurobiology including extracellular and intracellular recording, histochemistry, and immunohistochemistry. Format: lecture/laboratory, six hours per week. Evaluation will be based on class participation, laboratory notebooks and posters, two hour exams and a final exam.
In the Neurobiology course laboratory we focused on the crayfish neuromuscular system. Students used suction electrodes to record from the nerve innervating the postural muscles. There are only 6 motorneuron axons in this nerve and they are all spontaneously active. They then recorded postsynaptic potentials from these postural muscle fibers using glass microelectrodes. Once they had learned the basic recording techniques, students conducted a three week independent project on aspects of synaptic plasticity including facilitation, post-tetanic potentiation and long-term potentiation.

PSYC 316T - Clinical Neuroscience - Paul Solomon

Diagnosing and treating neurological diseases is the final frontier of medicine. Recent advances in neuroscience have had a profound impact on the understanding of diseases that affect cognition, behavior, and emotion. This course provides an in-depth analysis of the relationship between brain dysfunction and diseased state. We will focus on neurodegenerative disorders including Alzheimer's disease, Parkinson's disease, and Huntington's disease. We will consider diagnosis of disease, treatment strategies, as well as social and ethical issues. The course is taught in the tutorial format and provides students with the opportunity to present material based upon: (1) review of published literature, (2) analysis of case histories, and (3) observations of diagnosis and treatment of patients both live and on videotape. Students design and conduct an empirical project. Format: tutorial. Evaluation based on position papers, class participation, and research project report.

PSYC 312 - Drugs and Behavior - Betty Zimmerberg

This course studies the relationship between behavior and neurochemical changes in the brain. It begins with a detailed study of neurotransmitter systems, drug-receptor interactions, and sources of individual differences in drug response, such as gender and genetics. Special topics include the behavioral consequences of prenatal drug exposure, the role of classical and operant conditioning in the development and maintenance of alcohol and drug abuse, the neural basis of reward, and the interaction between cerebral lateralization and behavioral effects of drugs. Format: lecture, discussion and required empirical project. Requirements: an hour exam, an oral presentation, and a written report of research. This course will have several short writing exercises, and a final minimum 15-page paper that will be submitted in 4 sequential parts with revisions. The emphasis is on learning how to write clear and elegant scientific prose.

This year, there were 17 students and five empirical project groups. Two groups studied anxiety behaviors, one in iron deficient rats using a learning and memory task and the anti-anxiety drug Diazepam, and the other using the natural root called Kava, which has been described as having anxiolytic effects in adults, in rat pups in a maternal separation paradigm. Stimulants that are used to treat ADHD, Adderol and Ritalin, were the focus of two other groups. One looked at the effects of Ritalin on state dependent learning in adolescent rats and the other considered whether or not grapefruit juice effects the metabolism of Adderol using activity and the T-water maze tasks as indicators. Finally, the last group created an animal model of Obsessive Compulsive Disorder using a drug called Quinpirole, and then looked to see if DOI, a hallucinogen, lessened the occurrence of checking behavior in these animals.

PSYC 315 - Hormones and Behavior - Noah Sandstrom

This course studies the relationship between hormones and behavior. We review the mechanisms by which hormones act in the nervous system. We also investigate how hormones influence behavior as well as how behavior and experiences alter hormonal function. Specific topics to be examined include: sexual differentiation; courtship, reproduction and parental behavior; aggression; and learning and memory. Students critically review data from both human and animal studies. Format: seminar. Requirements: midterm and final exams, seminar presentations and participation in discussions, written and oral presentation of final project.

BIOL 310 - Neural Development - Lara Hutson

Development can be seen as a tradeoff between genetically-determined processes and environmental stimuli. The tension between these two inputs is particularly apparent in the developing nervous system, where many events must be predetermined, and where plasticity, or altered outcomes in response to environmental conditions, is also essential. Plasticity is reduced as development and differentiation proceed, and the potential for regeneration after injury or disease in adults is limited; however, some exceptions to this rule exist, and recent data suggest that the nervous system is not as hard-wired as previously thought. In this course we will discuss the mechanisms governing nervous system development, from relatively simple nervous systems such as that of the roundworm, to the more complicated nervous systems of humans, examining the roles played by genetically specified programs and non-genetic influences. We will also discuss the similarities and differences between development and regeneration, the extent to which the nervous system is hard-wired, and the controversial idea that degeneration represents "development in reverse." Format: lecture/discussion/laboratory, six hours per week. Evaluation will be based on exams, short papers and lab reports.
Syllabus included, see below.

BIOL 410 - Cell Dynamics - Lara Hutson

Far from being static entities, individual cells can exhibit dynamic behaviors, sometimes migrating great distances or structurally reorganizing as in the formation-or reformation-of neuronal synapses. The ability of cells to move and reshape underlies a vast array of normal biological processes, including immune function, embryonic development, and memory formation, as well as abnormal processes such as cancer growth and metastasis. It is through precise regulation of polymerization, depolymerization, and contraction of the cellular cytoskeleton that motility is achieved, and we are just beginning to understand the genetic and biophysical bases of how this regulation occurs. Not surprisingly, imprecise regulation of the cytoskeleton can have serious consequences, and several disorders arise from defects in this process. In this course we will review the primary literature covering migration and motility. Format: discussion, three hours per week. Evaluation will be based on class participation and several short papers.


Biol 410, Fall 2003
Cell Dynamics in Living Systems

Instructor Lara Hutson
Office: TBL 201
Phone: x4508
Email: lhutson@williams.edu
URL: http://www.williams.edu/biology/lhutson/

Description
In this course we will explore the different ways prokaryotic and eukaryotic cells achieve motility, with an emphasis on eukaryotic systems.

Reading material
We will primarily read original research papers, with an emphasis on the current literature. However, we will also read some papers of historical value that address central questions relating to cell motility. All of the papers are on your reading list, and papers for the first half of the semester are provided in the gray binder. Papers for the second half of the course will be distributed at a later date.

Evaluation
You will write four short papers distributed throughout the semester. Due dates are listed in the Reading List and are also listed on the Calendar located in Blackboard. Each paper will be no more than three pages, double-spaced, font size 12. (4x15% = 60% of grade)

I will be assigning questions for each set of readings. You will be required to keep notes on these, either in a separate notebook or on loose paper that can be kept in your gray notebook. Bring your notebook and the assigned readings to every class. I will collect your notebooks once during the semester for evaluation. (10% of grade)

As this is a discussion course, you will naturally be expected to participate in class. (30% of grade)

Attendance
You are expected to be on time and attend all classes. If you know in advance that you will miss a class, please notify me a week in advance and we will arrange for you to make up the work. If you miss class unexpectedly (e.g., due to illness), please contact me as soon as reasonable. If you need an extension on a paper, you must notify my at least 24 hours before it is due.

Office hours
Office hours will be held as needed. I prefer that you make an appointment, but in cases of desperation or uncontrollable whim, you are welcome to drop by my office any time.

Honor code
You should feel free to discuss the material with each other. However, all writing in your notebook work must be yours exclusively.

Your papers are expected to be your own work and are covered by the Statement of Academic Honesty as set forth in the Student Handbook, and the basic rules of attribution apply.

Biol 410, Fall 2003
Cell dynamics in living systems
Reading List

Bacterial chemotaxis
Tues. 9/9—Molecular mechanisms
1. Berg HC, Brown DA. 1972. Chemotaxis in Escherichia coli analysed by three-dimensional tracking. Nature. 239(5374):500-4.
2. Springer WR, Koshland DE Jr. 1977. Identification of a protein methyltransferase as the cheR gene product in the bacterial sensing system. Proc Natl Acad Sci U S A. 74(2):533-7.
3. Stock JB, Koshland DE Jr. 1978. A protein methylesterase involved in bacterial sensing. Proc Natl Acad Sci U S A. 75(8):3659-63.
4. Hess JF, Oosawa K, Kaplan N, Simon MI. 1988. Phosphorylation of three proteins in the signaling pathway of bacterial chemotaxis. Cell. 53(1):79-87.

Thurs. 9/11—Beyond signal transduction
5. Ninfa EG, Stock A, Mowbray S, Stock J. 1991. Reconstitution of the bacterial chemotaxis signal transduction system from purified components. J Biol Chem. 266(15):9764-70.
6. Alon U, Surette MG, Barkai N, Leibler S. 1999. Robustness in bacterial chemotaxis. Nature. 397(6715):168-71.
7. Koji Yonekura, Saori Maki-Yonekura, & Keiichi Namba. 2003. Complete atomic model of the bacterial flagellar filament by electron cryomicroscopy. Nature 424(6949):643-650

Sperm chemotaxis
Tue. 9/16—Sperm motility
8. Mohri H. 1993. Role of tubulin and dynein in spermatozoan motility. Mol Reprod Dev. 36(2):221-3.
9. Eisenbach M, Tur-Kaspa I. 1999. Do human eggs attract spermatozoa? Bioessays. 21(3):203-10.
10. Spehr M, Gisselmann G, Poplawski A, Riffell JA, Wetzel CH, Zimmer RK, Hatt H. 2003. Identification of a testicular odorant receptor mediating human sperm chemotaxis. Science. 299(5615):2054-8.

Amoeboid cells
Thu. 9/18—Actin
11. Wang YL. 1985. Exchange of actin subunits at the leading edge of living fibroblasts: possible role of treadmilling. J Cell Biol. 101(2):597-602.
12. Cortese JD, Schwab B 3rd, Frieden C, Elson EL. 1989. Actin polymerization induces a shape change in actin-containing vesicles. Proc Natl Acad Sci U S A. 86(15):5773-7.
13. Lewis AK, Bridgman PC. 1992. Nerve growth cone lamellipodia contain two populations of actin filaments that differ in organization and polarity. J Cell Biol. 119(5):1219-43.
14. Cramer LP, Siebert M, Mitchison TJ. 1997. Identification of novel graded polarity actin filament bundles in locomoting heart fibroblasts: implications for the generation of motile force. J Cell Biol. 136(6):1287-305.

Tue. 9/23—Tubulin
15. Euteneuer U, Schliwa M. 1984. Persistent, directional motility of cells and cytoplasmic fragments in the absence of microtubules. Nature. 310(5972):58-61.
16. Gonzalez Agosti C, Stidwill RP. 1992. The contributions of microtubules and F-actin to the in vitro migratory mechanisms of Hydra nematocytes as determined by drug interference experiments. Exp Cell Res. 200(1):196-204.
17. Ueda M, Ogihara S. 1994. Microtubules are required in amoeba chemotaxis for preferential stabilization of appropriate pseudopods. J Cell Sci. 107 ( Pt 8):2071-9.
18. Ballestrem C, Wehrle-Haller B, Hinz B, Imhof BA. 2000. Actin-dependent lamellipodia formation and microtubule-dependent tail retraction control-directed cell migration. Mol Biol Cell. 11(9):2999-3012.

Thu. 9/25—paper 1 due

Regulation of actin
Tue. 9/30—Polymerization
19. Carlsson L, Nystrom LE, Sundkvist I, Markey F, Lindberg U. 1977. Actin polymerizability is influenced by profilin, a low molecular weight protein in non-muscle cells. J Mol Biol. 115(3):465-83.
20. Pring M, Weber A, Bubb MR. 1992. Profilin-actin complexes directly elongate actin filaments at the barbed end. Biochemistry. 31(6):1827-36.
21. Cao LG, Babcock GG, Rubenstein PA, Wang YL. 1992. Effects of profilin and profilactin on actin structure and function in living cells. J Cell Biol. 117(5):1023-9.
22. Haugwitz, M., Noegel, A. A., Karakesisoglou, J. and Schleicher, M. 1994. Dictyostelium amoebae that lack G-actin sequestering profilins show defects in F-actin content, cytokinesis and development. Cell 79, 303-314.
23. Verheyen EM, Cooley L. 1994. Profilin mutations disrupt multiple actin-dependent processes during Drosophila development. Development. 120(4):717-28.

Thu. 10/2—Capping
24. Isenberg G, Aebi U, Pollard TD. 1980. An actin-binding protein from Acanthamoeba regulates actin filament polymerization and interactions. Nature. 288(5790):455-9.
25. Fuchtbauer A, Jockusch BM, Maruta H, Kilimann MW, Isenberg G. 1983. Disruption of microfilament organization after injection of F-actin capping proteins into living tissue culture cells. Nature. 304(5924):361-4.
26. Hug, C., Jay, P. Y., Reddy, I., McNally, J. G., Bridgman, P. C., Elson, E. L. and Cooper, J. A. 1995. Capping protein levels influence actin assembly and cell motility in Dictyostelium. Cell 81, 591-600

Tue. 10/7—Depolymerization/turnover

27. Aizawa, H., Sutoh, K. and Yahara, I. 1996. Overexpression of cofilin stimulates bundling of actin filaments, membrane ruffling, and cell movement in Dictyostelium. J. Cell Biol. 132, 335-344.
28. Carlier MF, Laurent V, Santolini J, Melki R, Didry D, Xia GX, Hong Y, Chua NH, Pantaloni D. 1997 Actin depolymerizing factor (ADF/cofilin) enhances the rate of filament turnover: implication in actin-based motility. J Cell Biol. 136(6):1307-22.
29. Didry D, Carlier MF, Pantaloni D. 1998. Synergy between actin depolymerizing factor/cofilin and profilin in increasing actin filament turnover. J Biol Chem. 273(40):25602-11.
30. Bubb MR, Yarmola EG, Gibson BG, Southwick FS. 2003. Depolymerization of actin filaments by profilin. Effects of profilin on capping protein function. J Biol Chem. 278(27):24629-35.

Thu. 10/9—Nucleation/Branching: Arp2/3
31. Machesky LM, Atkinson SJ, Ampe C, Vandekerckhove J, Pollard TD. 1994. Purification of a cortical complex containing two unconventional actins from Acanthamoeba by affinity chromatography on profilin-agarose. J Cell Biol. 127(1):107-15.
32. Mullins RD, Heuser JA, Pollard TD. 1998. The interaction of Arp2/3 complex with actin: nucleation, high affinity pointed end capping, and formation of branching networks of filaments. Proc Natl Acad Sci U S A. 95(11):6181-6.
33. Pantaloni D, Boujemaa R, Didry D, Gounon P, Carlier MF. 2000. The Arp2/3 complex branches filament barbed ends: functional antagonism with capping proteins. Nat Cell Biol. 2(7):385-91.

Thu. 10/16—Nucleation/Branching: WASP/Scar
34. Miki H, Sasaki T, Takai Y, Takenawa T. 1998. Induction of filopodium formation by a WASP-related actin-depolymerizing protein N-WASP. Nature. 391(6662):93-6.
35. Bear, J. E., Rawls, J. F. and Saxe III, C. L. 1998. Scar, a WASP-related protein, isolated as a suppressor of receptor defects in late Dictyostelium development. J. Cell Biol. 142, 1325-1335.
36. Machesky LM, Insall RH. 1998. Scar1 and the related Wiskott-Aldrich syndrome protein, WASP, regulate the actin cytoskeleton through the Arp2/3 complex. Curr Biol. 8(25):1347-56.
37. Snapper SB, Takeshima F, Anton I, Liu CH, Thomas SM, Nguyen D, Dudley D, Fraser H, Purich D, Lopez-Ilasaca M, Klein C, Davidson L, Bronson R, Mulligan RC, Southwick F, Geha R, Goldberg MB, Rosen FS, Hartwig JH, Alt FW. 2001. N-WASP deficiency reveals distinct pathways for cell surface projections and microbial actin-based motility. Nat Cell Biol. 3(10):897-904.

Tue. 10/21—Cross-linking/Bundling
38. Otto JJ, Kane RE, Bryan J. 1979. Formation of filopodia in coelomocytes: localization of fascin, a 58,000 dalton actin cross-linking protein. Cell. 17(2):285-93
39. Wallraff E, Wallraff HG. 1997. Migration and bidirectional phototaxis in Dictyostelium discoideum slugs lacking the actin cross-linking 120 kDa gelation factor. J Exp Biol. 200 ( Pt 24):3213-20.
40. Honda K, Yamada T, Endo R, Ino Y, Gotoh M, Tsuda H, Yamada Y, Chiba H, Hirohashi S. 1998. Actinin-4, a novel actin-bundling protein associated with cell motility and cancer invasion. J Cell Biol. 140(6):1383-93.
41. Rivero, F., Furukawa, R., Fechheimer, M. and Noegel A. A. 1999. Three actin cross-linking proteins, the 34 kDa actin-bundling protein, alpha-actinin, and gelation factor (ABP120), have both unique and redundant roles in growth and development of Dictyostelium discoideum. J. Cell Sci. 112, 2737-2751.

Thu. 10/23—Paper #2 due

Tue 10/28 & Thu. 10/30—Contraction and Adhesion
42. Lin CH, Espreafico EM, Mooseker MS, Forscher P. 1996. Myosin drives retrograde F-actin flow in neuronal growth cones. Neuron. 16(4):769-82.
43. Jung, G., Wu, X. and Hammer, J. A. 3rd. 1996. Dictyostelium mutants lacking multiple classic myosin I isoforms reveal combinations of shared and distinct functions. J. Cell Biol. 133, 305-323.
44. Diefenbach TJ, Latham VM, Yimlamai D, Liu CA, Herman IM, Jay DG. 2002. Myosin 1c and myosin IIB serve opposing roles in lamellipodial dynamics of the neuronal growth cone. J Cell Biol. 158(7):1207-17.
45. Ilic D, Furuta Y, Kanazawa S, Takeda N, Sobue K, Nakatsuji N, Nomura S, Fujimoto J, Okada M, Yamamoto T. 1995. Reduced cell motility and enhanced focal adhesion contact formation in cells from FAK-deficient mice. Nature. 377(6549):539-44.
46. Palecek SP, Loftus JC, Ginsberg MH, Lauffenburger DA, Horwitz AF. 1997 Integrin-ligand binding properties govern cell migration speed through cell-substratum adhesiveness. Nature. 385(6616):537-40. Erratum: Nature 388(6638):210.

Tue. 11/4 & Thu. 11/6—Rho GTPases and cell behavior
47. Nobes CD, Hall A. 1995. Rho, rac, and cdc42 GTPases regulate the assembly of multimolecular focal complexes associated with actin stress fibers, lamellipodia, and filopodia. Cell. 81(1):53-62.
48. Allen WE, Jones GE, Pollard JW, Ridley AJ. 1997. Rho, Rac and Cdc42 regulate actin organization and cell adhesion in macrophages. J Cell Sci. 110 ( Pt 6):707-20.
49. Ng J, Nardine T, Harms M, Tzu J, Goldstein A, Sun Y, Dietzl G, Dickson BJ, Luo L. 2002. Rac GTPases control axon growth, guidance and branching. Nature. 416(6879):442-7.
50. Azuma T, Witke W, Stossel TP, Hartwig JH, Kwiatkowski DJ. 1998. Gelsolin is a downstream effector of rac for fibroblast motility. EMBO J. 17(5):1362-70.
51. Maekawa, M., Ishizaki, T., Boku, S., Watanabe, N., Fujita, A., Iwamatsu, A., Obinata, T., Ohashi, K., Mizuno, K. and Narumiya, S. (1999). Signaling from Rho to the actin cytoskeleton through protein kinases ROCK and LIM-kinase. Science 285, 895-898.
52. Rohatgi R, Ma L, Miki H, Lopez M, Kirchhausen T, Takenawa T, Kirschner MW. 1999. The interaction between N-WASP and the Arp2/3 complex links Cdc42-dependent signals to actin assembly. Cell. 97(2):221-31.

Tue. 11/11 & Thu. 11/13—Rho GTPases: regulation of
53. Faix, J., Clougherty, C., Konzok, A., Mintert, U., Murphy, J., Albrecht, R., Mühlbauer, B. and Kuhlmann, J. (1998). The IQGAP-related protein DGAP1 interacts with Rac and is involved in the modulation of the F-actin cytoskeleton and control of cell motility. J. Cell Sci. 111, 3059-3071.
54. Sander EE, van Delft S, ten Klooster JP, Reid T, van der Kammen RA, Michiels F, Collard JG. 1998. Matrix-dependent Tiam1/Rac signaling in epithelial cells promotes either cell-cell adhesion or cell migration and is regulated by phosphatidylinositol 3-kinase. J Cell Biol. 143(5):1385-98.
55. Driessens MH, Hu H, Nobes CD, Self A, Jordens I, Goodman CS, Hall A. 2001. Plexin-B semaphorin receptors interact directly with active Rac and regulate the actin cytoskeleton by activating Rho. Curr Biol. 11(5):339-44.
56. Del Pozo MA, Kiosses WB, Alderson NB, Meller N, Hahn KM, Schwartz MA. 2002. Integrins regulate GTP-Rac localized effector interactions through dissociation of Rho-GDI. Nat Cell Biol. 4(3):232-9.
(57. Sander EE, ten Klooster JP, van Delft S, van der Kammen RA, Collard JG. 1999. Rac downregulates Rho activity: reciprocal balance between both GTPases determines cellular morphology and migratory behavior. J Cell Biol. 147(5):1009-22.)
58. Li Z, Aizenman CD, Cline HT. 2002. Regulation of rho GTPases by crosstalk and neuronal activity in vivo. Neuron. 33(5):741-50.

Tue. 11/18—Paper #3 due

Thu. 11/20 & Tue. 11/25—Proteolysis and Membrane recycling
59. Fambrough D, Pan D, Rubin GM, Goodman CS. 1996. The cell surface metalloprotease/disintegrin Kuzbanian is required for axonal extension in Drosophila. Proc Natl Acad Sci U S A. 93(23):13233-8.
60. Hattori M, Osterfield M, Flanagan JG. 2000. Regulated cleavage of a contact-mediated axon repellent. Science. 289(5483):1360-5.
61. Lawson MA, Maxfield FR. 1995. Ca(2+)- and calcineurin-dependent recycling of an integrin to the front of migrating neutrophils. Nature. 377(6544):75-9.
62. Igarashi M, Kozaki S, Terakawa S, Kawano S, Ide C, Komiya Y. 1996. Growth cone collapse and inhibition of neurite growth by Botulinum neurotoxin C1: a t-SNARE is involved in axonal growth. J Cell Biol. 134(1):205-15.
63. Jurney WM, Gallo G, Letourneau PC, McLoon SC. 2002. Rac1-mediated endocytosis during ephrin-A2- and semaphorin 3A-induced growth cone collapse. J Neurosci. 22(14):6019-28.


Tue. 12/2 & Thu. 12/4—Cancer metastasis and Genetic disease
64. Keely PJ, Westwick JK, Whitehead IP, Der CJ, Parise LV. 1997. Cdc42 and Rac1 induce integrin-mediated cell motility and invasiveness through PI(3)K. Nature. 390(6660):632-6.
65. Clark EA, Golub TR, Lander ES, Hynes RO. 2000. Genomic analysis of metastasis reveals an essential role for RhoC. Nature. 406(6795):532-5. Erratum in: Nature 2001 Jun 21;411(6840):974.
66. Rolli M, Fransvea E, Pilch J, Saven A, Felding-Habermann B. 2003. Activated integrin {alpha}v{beta}3 cooperates with metalloproteinase MMP-9 in regulating migration of metastatic breast cancer cells. Proc Natl Acad Sci U S A. 100(16):9482-9487.
67. Wong EV, Kenwrick S, Willems P, Lemmon V. 1995. Mutations in the cell adhesion molecule L1 cause mental retardation. Trends Neurosci. 18(4):168-72.
68. Howard TH, Hartwig J, Cunningham C. 1998. Lymphocyte-specific protein 1 expression in eukaryotic cells reproduces the morphologic and motile abnormality of NAD 47/89 neutrophils. Blood. 91(12):4786-95.
69. Devriendt K, Kim AS, Mathijs G, Frints SG, Schwartz M, Van Den Oord JJ, Verhoef GE, Boogaerts MA, Fryns JP, You D, Rosen MK, Vandenberghe P. 2001. Constitutively activating mutation in WASP causes X-linked severe congenital neutropenia. Nat Genet. 27(3):313-7.



Biology 310 - Neural Development
Syllabus
Instructor Lara Hutson
Office: TBL 201
Phone: x4508
email: lhutson@williams.edu
URL: http://www.williams.edu/biology/lhutson

Description
In this course we will cover the mechanisms of nervous system development and plasticity, with an emphasis on understanding experimental approaches. We will also discuss some recent advances into the bases of neurodevelopmental and neurodegenerative disorders. An integral part of this course will be acquiring the skills needed for investigation of experimentally testable questions, critical interpretation of data, and clear presentation of your ideas.

Readings
Our textbook is “Development of the Nervous System” by Sanes, Reh, and Harris (2000). This is available at Water Street Books, and a copy will be placed on reserve in Schow Library. Frequently, primary research or review articles will also be assigned. You will receive copies of these papers a week before the class in which they are discussed. Most of these will also be posted on Blackboard.

Assigned readings are intended to supplement material covered in lecture, but will not always mirror lectures precisely. You will be responsible for all material we cover in lecture, whether it is included in the text or not. Copies of the Powerpoint files for lecture will be posted on Blackboard, but it may be useful to additionally obtain lecture notes from someone.

Evaluation
Grades will be based on four short quizzes, three in class, and one self-scheduled after the end of the term (each 8% x 4 = 32%), a paper on a topic of your choice (18%), an oral presentation on the same topic (9%), in-class discussion (5%), and three lab reports (each 12% x 3 = 36%).

Honor code
The scientific process is by necessity collaborative. Therefore, you should feel free to discuss the material with whomever you please. However, the writing itself—of lab reports, papers, and quizzes—should be your own. The self-scheduled exam at the end of the term should be your work entirely. Always cite your references, whether or not you directly quote them. We will discuss the appropriate format for citations when we discuss each assignment, as they will vary. Be wary of web sites, as they frequently contain information that is inaccurate or incorrect. I will not accept web sites as references unless from a peer-reviewed scientific forum.



Lecture schedule

Date Topics Readings
Week 1
Feb. 6 Origins of the nervous system pp. 1-11
Week 2
Feb. 9 Neural induction I – Tissue interactions pp. 12-27
Feb. 11 Neural induction II – Neurogenic genes pp. 27-35
Feb. 13 Submit paper choices and
Patterning I - Anterior-posterior pp. 36-49; ref. 1*
Week 3
Feb. 16 Patterning II – Dorsal-ventral pp. 56-66
Feb. 18 Patterning III – Forebrain ref. 2*
Feb. 20 Winter Carnival
Week 4
Feb. 23 Specification of special structures ref. 3*
Feb. 25 Control of cell number and adult neurogenesis pp. 67-76; ref. 4*
Feb. 27 Histogenesis I – Cerebral cortex and retina pp. 81-87; 90-91; ref 5*
Week 5
Mar. 1 Histogenesis II – Cerebellum and neural crest pp. 88-89; 92-100

Mar. 3 Quiz 1 and
Cell fate I – C. elegans and Drosophila pp. 101-103; pp. 104-108; 114-117
Mar. 5 Cell fate II – Drosophila compound eye pp. 117-123; ref. 6*, 7*
Week 6
Mar. 8 Cell fate III – vertebrate eye, neural crest, and CNS pp. 125-135
Mar. 10 Neuritogenesis and growth cones pp. 145-161
Mar. 12 Special guest lecture, Sarah Gibbs in class;
Biology./Neuroscience seminar, Gianluca Gallo 2:30 TBL 112
Week 7
Mar. 15 Paper proposals due and
Axon guidance I - Guidepost cells, pioneers, & the extracellular matrix pp. 161-174; 181-185
Mar. 17 Axon guidance II – The search for cues pp. 185-197
Mar. 19 Axon guidance III – Lessons from Drosophilia ref. 8*
Mar. 20-Apr. 4 Spring break
Week 8
Apr. 5 Axon guidance IV – Other model systems ref. 9*
Apr. 7 Quiz 2 and
Regeneration ref. 10*, 11*
Apr. 9 Target selection pp. 203-212
Week 9
Apr. 12 Topographic maps I - Visual pp. 212-240
Apr. 14 Topographic maps II - Olfactory pp. 240-247
Apr. 16 Cell death I – Control of cell number pp. 248-264
Week 10
Apr. 19 Cell death II – Cellular mechanisms pp. 265-281; Summary p. 286
Apr. 21 First draft of paper due and
Synaptogenesis pp. 288-314
Apr. 23 Development of electrical properties pp. 337-348
Week 11
Apr. 26 Refinemtent of synaptic connections and
Neuroscience seminar Zaven Kaprielian, 4:00p.m. TBL 112 pp. 349-375
Apr. 28 Quiz 3 and Presentation 1 refs. TBA
Apr. 30 Presentations 2 and 3 refs.TBA
Week 12
May 3 Presentations 4 and 5 refs. TBA
May 5 Presentations 6 and 7 refs. TBA
May 7 No class
Week 13
May 10 Presentations 8 and 9 refs. TBA
May 12 Presentations 10 and 11 refs. TBA
May 14 Presentation 12 refs. TBA

May 18 Final draft of paper due
May 15-23 Self-scheduled quiz

*References
1 Begemann G, Meyer A. (2001) Hindbrain patterning revisited: timing and effects of retinoic acid signalling. Bioessays. 23(11):981-6.
2 Wilson SW, Rubenstein JL. (2000) Induction and dorsoventral patterning of the telencephalon. Neuron. 28(3):641-51.
3 Pichaud F, Desplan C. (2002) Pax genes and eye organogenesis. Curr Opin Genet Dev. 12(4):430-4.
4 Gould E, Gross CG. (2002) Neurogenesis in adult mammals: some progress and problems. J Neurosci. 22(3):619-23.
Rakic P. (2002) Adult neurogenesis in mammals: an identity crisis. J Neurosci. 22(3):614-8.
5 Noctor SC, Martinez-Cerdeno V, Ivic L, Kriegstein AR. (2004) Cortical neurons arise in symmetric and asymmetric division zones and migrate through specific phases. Nat Neurosci. 7(2):136-44.
6 Thomas BJ, Wassarman DA. (1999) A fly's eye view of biology. Trends Genet. 15(5):184-90.
7 Ou CY, Pi H, Chien CT. (2003) Control of protein degradation by E3 ubiquitin ligases in Drosophila eye development. Trends Genet. 19(7):382-9.
8 Keleman K, Rajagopalan S, Cleppien D, Teis D, Paiha K, Huber LA, Technau GM, Dickson BJ. (2002) Comm sorts robo to control axon guidance at the Drosophila midline. Cell. 110(4):415-27.
9 Richards LJ. (2002) Surrounded by Slit--how forebrain commissural axons can be led astray. Neuron. 33(2):153-5.
10 Condic ML. (2001) Adult neuronal regeneration induced by transgenic integrin expression. J Neurosci. 21(13):4782-8.
11 Hunt D, Coffin RS, Anderson PN. (2002) The Nogo receptor, its ligands and axonal regeneration in the spinal cord; a review. J Neurocytol. 31(2):93-120.



NSCI 401 - Topics in Neuroscience - Heather Williams

Neuroscientists explore issues inherent in the study of brain and behavior. The overall objective of this seminar is to create a culminating senior experience in which previous course work in specific areas in the Neuroscience Program can be brought to bear in a synthetic, interdisciplinary approach to understanding complex problems. The specific goals for students in this seminar are (1) to evaluate original research and critically examine the experimental evidence for theoretical issues, and (2) to gain an understanding of this discipline through group work, and oral presentations. Topics and instructional formats will vary somewhat from year to year, but in all cases the course will emphasize an integrative approach in which students will be asked to consider topics from a range of perspectives including molecular, cellular, systems, behavioral and clinical neuroscience. Previous topics have included memory, autism, depression, alcoholism, language development, and stress. Format: student-led discussions and presentations, three hours a week. Evaluation will be based on presentations, participation in class discussion, and a term paper.


BIOL 303 - Sensory Biology - Heather Williams

How are important conditions or changes in the environment received and transduced by organisms? We will examine the molecular and cellular bases of the
transduction and encoding of physical phenomena such as light, sound, and chemicals in a variety of organisms, including plants and invertebrates. The class will focus on questions such as: What properties of the physical world are sensed (and which ones are ignored)? What mechanisms are used to convert physical or chemical energy into a changed biological state within a cell? What are the consequences of this changed state? How are differences in the attributes of one modality in the physical world represented by differences in molecular and cellular processes? Some examples that are considered include: a comparison of visual structures and pigments in bacteria, plants, arthropods, molluscs, and primates; sound transduction and its musical consequences; and the olfactory system of mammals-which is able to produce a large variety of receptors specific to an individual's experience. Though there is no empirical project associated with this class, the lab section is less orchestrated by the professor and thus requires more innovation and planning by the students than do most labs. Students are provided with materials and the general guidelines, but are expected to decide how best to accomplish their goal on their own.


PSYC 316T - Clinical Neuroscience - Paul Solomon

Diagnosing and treating neurological diseases is the final frontier of medicine. Recent advances in neuroscience have had a profound impact on the understanding of diseases that affect cognition, behavior, and emotion. This course provides an in-depth analysis of the relationship between brain dysfunction and diseased state. We will focus on neurodegenerative disorders including Alzheimer's disease, Parkinson's disease, and Huntington's disease. We will consider diagnosis of disease, treatment strategies, as well as social and ethical issues. The course is taught in the tutorial format and provides students with the opportunity to present material based upon: (1) review of published literature, (2) analysis of case histories, and (3) observations of diagnosis and treatment of patients both live and on videotape. Students design and conduct an empirical project. Format: tutorial. Evaluation based on position papers, class participation, and research project report.


PSYC 312 - Drugs and Behavior - Betty Zimmerberg

This course studies the relationship between behavior and neurochemical changes in the brain. It begins with a detailed study of neurotransmitter systems, drug-receptor interactions, and sources of individual differences in drug response, such as gender and genetics. Special topics include the behavioral consequences of prenatal drug exposure, the role of classical and operant conditioning in the development and maintenance of alcohol and drug abuse, the neural basis of reward, and the interaction between cerebral lateralization and behavioral effects of drugs. Format: lecture, discussion and required empirical project. Requirements: an hour exam, an oral presentation, and a written report of research. This course will have several short writing exercises, and a final minimum 15-page paper that will be submitted in 4 sequential parts with revisions. The emphasis is on learning how to write clear and elegant scientific prose.
This year, there were three empirical project groups. Students studied the effects of neonatal toluene admionsitration on the development of aniety behavior, the effects of neonatal ketamine injections on juvenile learning and the effects of social setting on delayed matching performance. The toluene empirical project was submitted as a poster for the upcoming Society for Neuroscience meeting and the students have won a travel award from the Faculty for Undergraduate Neuroscience to present their research.


PSYC 315 - Hormones and Behavior - Noah Sandstrom

This course studies the relationship between hormones and behavior. We review the mechanisms by which hormones act in the nervous system. We also investigate how hormones influence behavior as well as how behavior and experiences alter hormonal function. Specific topics to be examined include: sexual differentiation; courtship, reproduction and parental behavior; aggression; and learning and memory. Students critically review data from both human and animal studies. Format: seminar. Requirements: midterm and final exams, seminar presentations and participation in discussions, written and oral presentation of final project.


APPENDIX IX: REPORT ON THE 2002 WILLIAMS COLLEGE
PROGRAM FOR UNDERGRADUATES AT THE MARINE BIOLOGICAL LABORATORY

Dates: June 9-August 17, 2003
Location: Williams College and the Marine Biological Laboratory in
Woods Hole, MA 02543

Director: Steve Zottoli

Funding support: Howard Hughes Medical Institute, Nan and Howard Schow and the Essel Foundation.

Williams College ’03 Student Participants:

Oliver T. Burton ‘06
DSimone K. Brass ‘06
Rosemary Eseh ’04
Jenica A. Chambers ‘04
Linda Gutoerrez’06
Michelle M. Kron ’04

Preparation prior to going to the Marine Biological Laboratory:

Two weeks were spent at Williams College preparing for the stay at the Marine Biological Laboratory (MBL) in Woods Hole, MA. The preparation consisted of lectures, readings, laboratory exercises and discussions (i.e., a short course in neurobiology). Students were provided with reprints of original literature pertaining to the research of those individuals who they would interact with at the MBL. They were encouraged to start reading this material. Students assembled a physiological recording station similar to the one they would use in Woods Hole. They tested the station by studying the stretch receptor of the crayfish (Crawdad, Sinauer). I encouraged collaboration between the group so that those students with more experience (3 rising seniors) could help instruct those with less experience (3 rising sophomores). I also used a “tutorial” approach to learning. Although I provided guidance and instruction when necessary, I required that the students take initiative in their own learning. Students were challenged to defend their positions when it seemed appropriate.

Student scheduled activities while at the MBL:

Once in Woods Hole, the day was divided to provide Williams students with an exposure to the diversity of teaching and research at the MBL. Students attended lectures in the morning, met with scientists at lunch, conducted research in the afternoon and attended seminars in the evening. The students were directed to certain lectures with the understanding that in many cases the material would be advanced (MBL courses are targeted at the graduate level). Past experience has indicated that as the students become more familiar with neuroscience, the lectures are easier to absorb. Social activities included cookouts, pizza parties and softball.

Morning sessions:

As was true last year, our laboratory space was contiguous with the MBL SPINES course (Summer Program in Neuroscience, Ethics and Survival). The individuals in the SPINES course are underrepresented minority students and they provided role models for the students in the Williams program. The Williams students and SPINES students attended morning lecture/laboratory sessions together for three weeks. The Williams students were invited by Joe Martinez, co-Director of the SPINES course, to attend all SPINES lectures and functions.

Richard LeBaron, University of Texas San Antonio, directed morning sessions for the first week on tissue culture. Students learned dissection of the rat embryo brain to isolate hippocampal neurons, they learned how to dissociate and culture the neurons.

Ruben Hernandez, University of Texas San Antonio, directed the second week and focused on electrophysiology of the the rat hippocampal slice. Students learned how to dissect and prepare a hippocampal slice for recording. They recorded extracellularly from the slice and evoked long-term potentiation (LTP).

Steve Zottoli, Williams College, directed the third week and presented an introduction to studies of single cells in the vertebrate central nervous system. The Williams students taught the SPINES students the various experimental techniques they had learned over their first few weeks at the MBL. These techniques included: microelectrode pulling, dissection, and recording from single neurons in the cunner brain.

The MBL is a world-renowned center for research and teaching in the sciences. Many courses are given in the summer months and after the 3-week session with the SPINES students was completed, Williams students were asked to attend morning lectures in one or more of the following courses: Embryology, Neurobiology, Neural Systems and Behavior, Methods in Computational Neuroscience, Parasitology and Physiology courses.

Lunch Sessions with MBL Scientists:

The following schedule was arranged for students to meet with resident MBL neuroscientists during lunch. Students were required to read the papers (listed below) of these scientists before the meeting. I would typically meet with the students to discuss the papers before their scheduled meeting to insure that they understood the scientist’s hypothesis and how it was to be tested. Based on their readings, students prepared questions to ask the scientists. The discussion ranged from science to career paths, to ethics, etc. Meetings with specific scientists other than those listed were arranged on request assuming that the scientist in question was free to meet.

Scheduled meetings with MBL scientists

Scientist Topic Date Time Meeting place

Felix Schweizer Synaptic 6/25 noon Lillie steps
UCLA transmission

Kamran Khodakhah LTD 6/26 noon Lillie steps
Albert Einstein
College of Medicine

Pizza with SPINES 7/1 5pm MRC

Dave Bodznick Electroreception 7/2 noon Lillie steps
Wesleyan Univ.

Roxanna Smolowitz
Veterinary Pathologist
MBL Anesthesia 7/2 4pm Loeb 304

Janis Weeks Plasticity during 7/2 9pm Loeb, 1st floor
Univ. Oregon development

Grae Davis Synaptic 7/3 noon Lillie steps
UCSF Homeostasis

Joe Fetcho Imaging of neurons noon Lillie steps
SUNY Stoney Brook in living larvae

Bob Barlow Limulus 7/9 noon Lillie steps
Syracuse Univ. vision

Steve Hadjuk Parisitology 7/16 noon Lillie steps

Shelly Segal Author 7/17 noon Lillie parking
Population Council lot

Roger Hanlon Cephalopod 7/23 noon MRC
Director, Marine behavior
Resources, MBL

Orian Shirihai Mitochondrial transporters 7/30 noon Lillie steps

Dan Barry M.D./Ph.D. to Astronaut 8/12 noon Lillie steps
NASA astronaut

Liz Jonas Recording from 8/13 noon Lillie steps
Len Kaczmarek Single channels of
Yale Univ. Mitochondria in situ


MBL Scientific Meetings: The 2003 General Scientific Meetings were held August 11-13 in the Lillie Auditorium.


Other events:

Visit of Mattias Gruhn from Cornell University from 7/12-7/15 to demonstrate procedures for recording chronically from crayfish nerves.

Simone Bras worked with Jorge Moreira, University of Sao Paulo, Ribeirao Preto, Brazil. Researches post-terminal protein concentrations in the squid giant synapse using electron microscopy.

Many of the students arranged private sessions with scientists. For example Michelle Kron met with Elaine Bearer from Brown to discuss M.D./Ph.D. programs.


Original Research Component:

An important part of the summer program involved an exposure to original research. Students worked as a team on the research project described below. The objective was to train each student in the techniques necessary to record from a single neuron in the vertebrate brain, and then to use these techniques to design and implement an original research project.


Research Description:

Physiological studies on the dorsal cells in the cunner:
Tautoglabrus adspersus. A number of fish have large neurons called supramedullary neurons or dorsal cells depending on whether they are located on the medulla oblongata or spinal cord respectively. Although these neurons have been known for over 100 years their function is still a mystery. Intracellular recordings were made from individual dorsal cells while stimulating a number of potential sources of afferent input (e.g., skin). Once recording techniques were mastered, the students studied the effect of the anesthetic tricaine on physiological parameters of these cells (i.e., spike height and current needed to evoke a response). The independent project resulted in a short note to be published in the Biological Bulletin in October:

Zottoli, S.J., Burton, O.T., Chambers, J.A., Eseh, R., Gutiérrez, L.M. and Kron, M.M. Transient Use of Tricaine to Remove the Telencephalon has no Residual Effects on Physiological Recordings of Supramedullary/Dorsal Neurons of the Cunner, Tautogolabrus adspersus Biol. Bull., 204 (in press) 2003.


Evening Seminars:

Students were encouraged to attend Monday, Wednesday and Thursday evening seminars sponsored by the Neuroscience Institute at MBL. In addition they were encouraged to attend the Friday evening series on broad topics in biology. A list of the titles and speakers of the Friday evening series is given below:


Friday Evening Lecture Series

Lillie Auditorium, 8:00 PM. Lectures are free and open to the public.

Date: Event:

06/20/03 Lang Lecture - Martha McClintock, The University of Chicago - "Scents and Sensibility: Pheromones and Social Odors in Humans and Other Animals"

06/27/03 Susan Lindquist, Whitehead Institute for Biomedical Research - "From Mad Cows to 'psi-chotic' Yeast: Strange Diseases and Strange Genetics"

07/04/03 Tony McMichael, Australian National University - "Climate Change and Human Health: The Picture Begins to Clarify"

07/11/03 James Hudspeth, The Rockefeller University - "Making an Effort to Listen: Mechanical Amplification by Novel Molecular Motors in the Ear"

07/17/03-
07/18/03 Forbes Lectures - Darcy Kelley, Columbia University - "Brain to Brain: A Neurobiology of Vocal Communication" & "Generating Male and Female Brains: A Molecular Alphabet for Sexual Differentiation"

07/25/03 Glassman Lecture - R. John Collier, Harvard Medical School - "Addressing the Threat of Anthrax"

08/01/03 Joel Rosenbaum, Yale University - "Intraflagellar Transport and Cilia-Dependent Diseases"

08/08/03 Lenny Guarente, Massachusetts Institute of Technology - "Regulation of Aging by SIR2"

08/15/03 George Martin, University of Washington - "Gene Action in the Pathobiology of Aging"

Other scheduled activities at the MBL:

A series of activities were organized to broaden the exposure of the Williams Students to the vibrant scientific community at the MBL:

A collecting trip on the MBL fishing vessel, Gemma (July 11), a pizza party (June 30th) and a number of Sunday cookouts were organized to allow social interaction between the SPINES group and the Williams group.

We hosted the Williams College Summer Science Program for Minority Students for a day. The SSP is a 5-week program on the Williams College campus and exposes minority students who have been accepted to Williams College to basic material in English, mathematics, biology and chemistry. The SSP students drove down from Williams College, and we gave them a tour of the facilities, including our laboratory, as well as a series of presentations of the research conducted at the MBL. Prior to the arrival of the SSP students, the Williams students chose and prepared a presentation on one of the marine organisms commonly used for research at the MBL. This required that the Williams student had to learn about some natural history of the organism and the questions that were being addressed using this organism. The students practiced their presentations to other students in the group prior to the arrival of the SSP, and they wrote a short essay on the topic. The presentations were followed by a picnic.

 

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